longevity-genie/gget-mcp
Bioinformatic MCP server that wraps the most useful functions of the gget library
Platform-specific configuration:
{
"mcpServers": {
"gget-mcp": {
"command": "npx",
"args": [
"-y",
"gget-mcp"
]
}
}
}Add the config above to .claude/settings.json under the mcpServers key.
[](https://github.com/longevity-genie/gget-mcp/actions/workflows/test.yml) [](https://badge.fury.io/py/gget-mcp) [](https://www.python.org/downloads/) [](https://opensource.org/licenses/MIT) [](https://github.com/astral-sh/ruff)
MCP (Model Context Protocol) server for the gget bioinformatics library.
This server implements the Model Context Protocol (MCP) for gget, providing a standardized interface for accessing powerful bioinformatics tools and databases. MCP enables AI assistants and agents to perform complex genomics queries through structured interfaces.
The gget bioinformatics toolkit provides efficient querying of genomic databases and includes functions for:
<details> <summary>See how the gget MCP server works in practice with AI assistants</summary>
👤 User: "Analyze the TP53 gene - find its details and protein sequence, then check for cancer mutations"
🤖 AI Assistant: I'll help you analyze TP53 step by step:
*[Uses gget_search]* → Found TP53 (ENSG00000141510) on chromosome 17 *[Uses gget_info]* → TP53 is a protein-coding tumor suppressor gene *[Uses gget_seq with translate=True]* → Retrieved 393 amino acid protein sequence *[Uses gget_cosmic]* → Found hotspot mutations R175H, R248Q, R273H in multiple cancers
👤 User: "Now predict the 3D structure of this protein s
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